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2009

Jagode, H., J. Dongarra, S. Alam, J. Vetter, W.. Spear, and A. D. Malony, “A Holistic Approach for Performance Measurement and Analysis for Petascale Applications,” ICCS 2009 Joint Workshop: Tools for Program Development and Analysis in Computational Science and Software Engineering for Large-Scale Computing, vol. 2009, Baton Rouge, Louisiana, Springer-Verlag Berlin Heidelberg 2009, pp. 686-695, May 2009.

(3.96 MB)

Dongarra, J., P. Beckman, P. Aerts, F. Cappello, T. Lippert, S. Matsuoka, P. Messina, T. Moore, R. Stevens, A. Trefethen, et al., “The International Exascale Software Project: A Call to Cooperative Action by the Global High Performance Community,” International Journal of High Performance Computing Applications (to appear), July 2009.

(203.04 KB)

Jagode, H., S. Moore, D. Terpstra, J. Dongarra, A. Knuepfer, M. Jurenz, M. S. Mueller, and W. E. Nagel, “I/O Performance Analysis for the Petascale Simulation Code FLASH,” ISC'09, Hamburg, Germany, June 2009.

(88.88 KB)

Li, Y., J. Dongarra, and S. Tomov, “A Note on Auto-tuning GEMM for GPUs,” 9th International Conference on Computational Science (ICCS 2009), no. 5544-5545, Baton Rouge, LA, pp. 884-892, May 2009.

(236.02 KB)

Agullo, E., J. Demmel, J. Dongarra, B. Hadri, J. Kurzak, J. Langou, H. Ltaeif, P. Luszczek, R. Nath, S. Tomov, et al., Numerical Linear Algebra on Emerging Architectures: The PLASMA and MAGMA Projects , Portland, OR, The International Conference for High Performance Computing, Networking, Storage, and Analysis (SC09), November 2009.

(3.53 MB)

Agullo, E., J. Demmel, J. Dongarra, B. Hadri, J. Kurzak, J. Langou, H. Ltaeif, P. Luszczek, and S. Tomov, “Numerical Linear Algebra on Emerging Architectures: The PLASMA and MAGMA Projects,” Journal of Physics: Conference Series, vol. 180, 00 2009.

(119.37 KB)

Nath, R., J. Dongarra, S. Tomov, H. Ltaeif, and P. Du, Numerical Linear Algebra on Hybrid Architectures: Recent Developments in the MAGMA Project , Portland, Oregon, The International Conference for High Performance Computing, Networking, Storage, and Analysis (SC09), November 2009.

(1.41 MB)

Alvaro, W., J. Kurzak, and J. Dongarra, “Optimizing Matrix Multiplication for a Short-Vector SIMD Architecture - CELL Processor,” Parallel Computing, vol. 35, pp. 138-150, 00 2009.

(591.16 KB)

Ltaeif, H., J. Kurzak, and J. Dongarra, “Parallel Band Two-Sided Matrix Bidiagonalization for Multicore Architectures,” IEEE Transactions on Parallel and Distributed Systems (to appear), May 2009.

(208.16 KB)

Buttari, A., J. Dongarra, J. Kurzak, and J. Langou, “Parallel Dense Linear Algebra Software in the Multicore Era,” in Cyberinfrastructure Technologies and Applications: Nova Science Publishers, Inc., pp. 9-24, 00 2009.

Youseff, L., K. Seymour, H. You, D. Zagorodnov, J. Dongarra, and R. Wolski, “Paravirtualization Effect on Single- and Multi-threaded Memory-Intensive Linear Algebra Software,” Cluster Computing Journal: Special Issue on High Performance Distributed Computing, vol. 12, no. 2: Springer Netherlands, pp. 101-122, 00 2009.

(451.07 KB)

Tomov, S., W. Lu, J. Bernholc, S. Moore, and J. Dongarra, “Performance evaluation for petascale quantum simulation tools,” Proceedings of CUG09, Atlanta, GA, May 2009.

(1.09 MB)

Langou, J., and J. Dongarra, “The Problem with the Linpack Benchmark Matrix Generator,” International Journal of High Performance Computing Applications, vol. 23, no. 1, pp. 5-14, 00 2009.

(136.41 KB)

Kurzak, J., and J. Dongarra, “QR Factorization for the CELL Processor,” Scientific Programming (to appear), 00 2009.

(234.02 KB)

Bouteiller, A., T. Ropars, G. Bosilca, C. Morin, and J. Dongarra, “Reasons for a Pessimistic or Optimistic Message Logging Protocol in MPI Uncoordinated Failure Recovery,” CLUSTER '09, New Orleans, IEEE, August 2009.

(191.36 KB)

Dongarra, J., H. Meuer, H. D. Simon, and E. Strohmaier, “Recent Trends in High Performance Computing,” in Birth of Numerical Analysis (to appear), 00 2009.

Gustavson, F. G., J. Wasniewski, J. Dongarra, and J. Langou, “Rectangular Full Packed Format for Cholesky's Algorithm: Factorization, Solution and Inversion,” ACM TOMS (to appear), 00 2009.

(896.03 KB)

Dai, Y-S., and J. Dongarra, “Reliability and Performance Modeling and Analysis for Grid Computing,” in Handbook of Research on Scalable Computing Technologies (to appear): IGI Global, pp. 219-245, 00 2009.

(200.57 KB)

Song, F., S. Moore, and J. Dongarra, “A Scalable Non-blocking Multicast Scheme for Distributed DAG Scheduling,” The International Conference on Computational Science 2009 (ICCS 2009), vol. 5544, Baton Rouge, LA, pp. 195-204, May 2009.

(228.45 KB)

Kurzak, J., H. Ltaeif, J. Dongarra, and R. M. Badia, “Scheduling Linear Algebra Operations on Multicore Processors,” University of Tennessee Computer Science Department Technical Report, UT-CS-09-636 (Also LAPACK Working Note 213), 00 2009.

(716.18 KB)

Kurzak, J., H. Ltaeif, J. Dongarra, and R. M. Badia, “Scheduling Linear Algebra Operations on Multicore Processors,” Concurrency Practice and Experience (to appear), 00 2009.

(716.18 KB)

Hadri, B., H. Ltaeif, E. Agullo, and J. Dongarra, “Tall and Skinny QR Matrix Factorization Using Tile Algorithms on Multicore Architectures,” Innovative Computing Laboratory Technical Report (also LAPACK Working Note 222 and CS Tech Report UT-CS-09-645), no. ICL-UT-09-03, September 2009.

(464.23 KB)

Hadri, B., H. Ltaeif, E. Agullo, and J. Dongarra, “Tile QR Factorization with Parallel Panel Processing for Multicore Architectures,” accepted in 24th IEEE International Parallel and Distributed Processing Symposium (IPDPS 2010), Atlanta, GA, December 2009.

Hoefler, T., Y-S. Dai, and J. Dongarra, “Towards Efficient MapReduce Using MPI,” Lecture Notes in Computer Science, Recent Advances in Parallel Virtual Machine and Message Passing Interface - 16th European PVM/MPI Users' Group Meeting, vol. 5759, Espoo, Finland, Springer Berlin / Heidelberg, pp. 240-249, 00 2009.

Jagode, H., A. Knuepfer, J. Dongarra, M. Jurenz, M. S. Mueller, and W. E. Nagel, “Trace-based Performance Analysis for the Petascale Simulation Code FLASH,” Innovative Computing Laboratory Technical Report, no. ICL-UT-09-01, April 2009.

(887.54 KB)

Seymour, K., A. YarKhan, and J. Dongarra, “Transparent Cross-Platform Access to Software Services using GridSolve and GridRPC,” in Cloud Computing and Software Services: Theory and Techniques (to appear): CRC Press, 00 2009.

2008

“,” 8th International Conference on Computational Science (ICCS), Proceedings Parts I, II, and III, Lecture Notes in Computer Science, vol. 5101, Krakow, Poland, Springer Berlin, January 2008.

“,” 7th International parallel Processing and Applied Mathematics Conference, Lecture Notes in Comptuer Science, vol. 4967, Gdansk, Poland, Springer Berlin, January 2008.

“,” 15th European PVM/MPI Users' Group Meeting, Recent Advances in Parallel Virtual Machine and Message Passing Interface, Lecture Notes in Computer Science, vol. 5205, Dublin Ireland, Springer Berlin, January 2008.

Chen, Z., and J. Dongarra, “Algorithm-Based Fault Tolerance for Fail-Stop Failures,” IEEE Transactions on Parallel and Distributed Systems, vol. 19, no. 12, January 2008.

(340.49 KB)

Bosilca, G., R. Delmas, J. Dongarra, and J. Langou, “Algorithmic Based Fault Tolerance Applied to High Performance Computing,” University of Tennessee Computer Science Technical Report, UT-CS-08-620 (also LAPACK Working Note 205), January 2008.

(313.55 KB)

Song, F., S. Moore, and J. Dongarra, “Analytical Modeling for Affinity-Based Thread Scheduling on Multicore Platforms,” University of Tennessee Computer Science Technical Report, UT-CS-08-626, January 2008.

(650.75 KB)

Seymour, K., H. You, and J. Dongarra, “A Comparison of Search Heuristics for Empirical Code Optimization,” The 3rd international Workshop on Automatic Performance Tuning, Tsukuba, Japan, October 2008.

(772.48 KB)

Baboulin, M., J. Dongarra, S. Gratton, and J. Langou, “Computing the Conditioning of the Components of a Linear Least Squares Solution,” VECPAR '08, High Performance Computing for Computational Science, Toulouse, France, January 2008.

(374.97 KB)

Dongarra, J., R. Graybill, W. Harrod, R. Lucas, E. Lusk, P. Luszczek, J. McMahon, A. Snavely, J. Vetter, K. Yelick, et al., “DARPA's HPCS Program: History, Models, Tools, Languages,” in Advances in Computers, vol. 72: Elsevier, January 2008.

(3.61 MB)

Baboulin, M., J. Demmel, J. Dongarra, S. Tomov, and V. Volkov, Enhancing the Performance of Dense Linear Algebra Solvers on GPUs (in the MAGMA Project) , Austin, TX, The International Conference for High Performance Computing, Networking, Storage, and Analysis (SC08), November 2008.

(5.28 MB)

Buttari, A., J. Dongarra, J. Kurzak, J. Langou, J. Langou, P. Luszczek, and S. Tomov, “Exploiting Mixed Precision Floating Point Hardware in Scientific Computations,” in High Performance Computing and Grids in Action, Amsterdam, IOS Press, January 2008.

(92.95 KB)

Dongarra, J., S. Moore, G. D. Peterson, S. Tomov, J. Allred, V. Natoli, and D. Richie, “Exploring New Architectures in Accelerating CFD for Air Force Applications,” Proceedings of the DoD HPCMP User Group Conference, Seattle, Washington, January 2008.

(492.86 KB)

Alvaro, W., J. Kurzak, and J. Dongarra, “Fast and Small Short Vector SIMD Matrix Multiplication Kernels for the CELL Processor,” University of Tennessee Computer Science Technical Report, no. UT-CS-08-609, (also LAPACK Working Note 189), January 2008.

(500.99 KB)

Dongarra, J., and P. Luszczek, “How Elegant Code Evolves With Hardware: The Case Of Gaussian Elimination,” in Beautiful Code Leading Programmers Explain How They Think (Chapter 14), pp. 243-282, January 2008.

(257 KB)

Dongarra, J., J. Demmel, P. Husbands, and P. Luszczek, “HPCS Library Study Effort,” University of Tennessee Computer Science Technical Report, UT-CS-08-617, January 2008.

(73.22 KB)

Youseff, L., K. Seymour, H. You, J. Dongarra, and R. Wolski, “The Impact of Paravirtualized Memory Hierarchy on Linear Algebra Computational Kernels and Software,” ACM/IEEE International Symposium on High Performance Distributed Computing, Boston, MA., June 2008.

(403.89 KB)

Hardt, M., K. Seymour, J. Dongarra, M. Zapf, and N. Ruiter, “Interactive Grid-Access Using Gridsolve and Giggle,” Computing and Informatics, vol. 27, no. 2, pp. 233-248,ISSN1335-9150, 00 2008.

(533.4 KB)

Canning, A., J. Dongarra, J. Langou, O. Marques, S. Tomov, C. Voemel, and L-W. Wang, “Interior State Computation of Nano Structures,” PARA 2008, 9th International Workshop on State-of-the-Art in Scientific and Parallel Computing, Trondheim, Norway, May 2008.

(137.12 KB)

Dongarra, J., P. Luszczek, and A. Petitet, “The LINPACK Benchmark: Past, Present, and Future,” Concurrency: Practice and Experience, vol. 15, pp. 803-820, 00 2008.

(94.86 KB)

Dongarra, J., J-F. Pineau, Y. Robert, and F. Vivien, “Matrix Product on Heterogeneous Master Worker Platforms,” 2008 PPoPP Conference, Salt Lake City, Utah, January 2008.

Dongarra, J., G. H. Golub, E. Grosse, C. Moler, and K. Moore, “Netlib and NA-Net: Building a Scientific Computing Community,” IEEE Annals of the History of Computing, vol. 30, no. 2, pp. 30-41, January 2008.

(352.71 KB)

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