Publications

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Book Chapter
Tomov, S., and J. Dongarra, “Dense Linear Algebra for Hybrid GPU-based Systems,” Scientific Computing with Multicore and Accelerators, Boca Raton, Florida, CRC Press, 2010.
Baboulin, M., J. Dongarra, A. Remy, S. Tomov, and I. Yamazaki, “Dense Symmetric Indefinite Factorization on GPU Accelerated Architectures,” Lecture Notes in Computer Science, vol. 9573: Springer International Publishing, pp. 86-95, September 2015, 2016.  (327.14 KB)
Conference Paper
Haidar, A., J. Kurzak, G. Pichon, and M. Faverge, “ A Data Flow Divide and Conquer Algorithm for Multicore Architecture,” 29th IEEE International Parallel & Distributed Processing Symposium (IPDPS), Hyderabad, India, IEEE, May 2015.  (535.44 KB)
Beck, M., T. Moore, N. French, E. Kissel, and M. Swany, “Data Logistics: Toolkit and Applications,” 5th EAI International Conference on Smart Objects and Technologies for Social Good, Valencia, Spain, September 2019.  (6.71 MB)
Nicolae, B., J. Li, J. M. Wozniak, G. Bosilca, M. Dorier, and F. Cappello, “DeepFreeze: Towards Scalable Asynchronous Checkpointing of Deep Learning Models,” 20th IEEE/ACM International Symposium on Cluster, Cloud and Internet Computing (CCGRID), Melbourne, VIC, Australia, IEEE, May 2020.  (424.19 KB)
Yamazaki, I., S. Tomov, and J. Dongarra, “Deflation Strategies to Improve the Convergence of Communication-Avoiding GMRES,” 5th Workshop on Latest Advances in Scalable Algorithms for Large-Scale Systems, New Orleans, LA, November 2014.  (465.52 KB)
Benoit, A., V. Le Fèvre, P. Raghavan, Y. Robert, and H. Sun, “Design and Comparison of Resilient Scheduling Heuristics for Parallel Jobs,” 22nd Workshop on Advances in Parallel and Distributed Computational Models (APDCM 2020), New Orleans, LA, IEEE Computer Society Press, May 2020.  (696.21 KB)
Yamazaki, I., J. Kurzak, P. Luszczek, and J. Dongarra, “Design and Implementation of a Large Scale Tree-Based QR Decomposition Using a 3D Virtual Systolic Array and a Lightweight Runtime,” Workshop on Large-Scale Parallel Processing, IPDPS 2014, Phoenix, AZ, IEEE, May 2014.  (398.16 KB)
Dongarra, J., S. Hammarling, N. J. Higham, S. Relton, P. Valero-Lara, and M. Zounon, “The Design and Performance of Batched BLAS on Modern High-Performance Computing Systems,” International Conference on Computational Science (ICCS 2017), Zürich, Switzerland, Elsevier, June 2017.  (446.14 KB)
Kabir, K., A. Haidar, S. Tomov, and J. Dongarra, “On the Design, Development, and Analysis of Optimized Matrix-Vector Multiplication Routines for Coprocessors,” ISC High Performance 2015, Frankfurt, Germany, July 2015.  (1.49 MB)
Cao, C., G. Bosilca, T. Herault, and J. Dongarra, “Design for a Soft Error Resilient Dynamic Task-based Runtime,” 29th IEEE International Parallel & Distributed Processing Symposium (IPDPS), Hyderabad, India, IEEE, May 2015.  (2.31 MB)
Brown, C., A. Abdelfattah, S. Tomov, and J. Dongarra, “Design, Optimization, and Benchmarking of Dense Linear Algebra Algorithms on AMD GPUs,” 2020 IEEE High Performance Extreme Computing Virtual Conference: IEEE, September 2020.  (476.36 KB)
Faverge, M., J. Herrmann, J. Langou, B. Lowery, Y. Robert, and J. Dongarra, “Designing LU-QR Hybrid Solvers for Performance and Stability,” IPDPS 2014, Phoenix, AZ, IEEE, May 2014.  (4.2 MB)
Abdelfattah, A., A. Haidar, S. Tomov, and J. Dongarra, “On the Development of Variable Size Batched Computation for Heterogeneous Parallel Architectures,” The 17th IEEE International Workshop on Parallel and Distributed Scientific and Engineering Computing (PDSEC 2016), IPDPS 2016, Chicago, IL, IEEE, May 2016.  (708.62 KB)
Marin, G., C. McCurdy, and J. Vetter, “Diagnosis and Optimization of Application Prefetching Performance,” Proceedings of the 27th ACM International Conference on Supercomputing (ICS '13), Eugene, Oregon, USA, ACM Press, June 2013.  (827.31 KB)
Deshmukh, S., R. Yokota, G. Bosilca, and Q. Ma, “O(N) distributed direct factorization of structured dense matrices using runtime systems,” 52nd International Conference on Parallel Processing (ICPP 2023), Salt Lake City, Utah, ACM, August 2023.
Herault, T., Y. Robert, G. Bosilca, R. Harrison, C. Lewis, E. Valeev, and J. Dongarra, “Distributed-Memory Multi-GPU Block-Sparse Tensor Contraction for Electronic Structure,” 35th IEEE International Parallel & Distributed Processing Symposium (IPDPS 2021), Portland, OR, IEEE, May 2021.
Le Fèvre, V., G. Bosilca, A. Bouteiller, T. Herault, A. Hori, Y. Robert, and J. Dongarra, “Do moldable applications perform better on failure-prone HPC platforms?,” 11th Workshop on Resiliency in High Performance Computing in Clusters, Clouds, and Grids, Turin, Italy, Springer Verlag, August 2018.  (360.72 KB)
Zaitsev, D., and P. Luszczek, “Docker Container based PaaS Cloud Computing Comprehensive Benchmarks using LAPACK,” Computer Modeling and Intelligent Systems CMIS-2020, Zaporizhzhoa, March 2020.  (451.33 KB)
Yamazaki, I., S. Rajamanickam, E. G. Boman, M. Hoemmen, M. A. Heroux, and S. Tomov, “Domain Decomposition Preconditioners for Communication-Avoiding Krylov Methods on a Hybrid CPU/GPU Cluster,” The International Conference for High Performance Computing, Networking, Storage and Analysis (SC 14), New Orleans, LA, IEEE, November 2014.
Donfack, S., S. Tomov, and J. Dongarra, “Dynamically balanced synchronization-avoiding LU factorization with multicore and GPUs,” Fourth International Workshop on Accelerators and Hybrid Exascale Systems (AsHES), IPDPS 2014, May 2014.  (490.08 KB)
Conference Proceedings
Bosilca, G., A. Bouteiller, A. Danalis, T. Herault, P. Lemariner, and J. Dongarra, “DAGuE: A Generic Distributed DAG Engine for High Performance Computing,” Proceedings of the Workshops of the 25th IEEE International Symposium on Parallel and Distributed Processing (IPDPS 2011 Workshops), Anchorage, Alaska, USA, IEEE, pp. 1151-1158, 00 2011.  (830.85 KB)
Sid-Lakhdar, W. M., M. Aznaveh, P. Luszczek, and J. Dongarra, “Deep Gaussian process with multitask and transfer learning for performance optimization,” 2022 IEEE High Performance Extreme Computing Conference (HPEC), pp. 1-7, September 2022.
Tomov, S., R. Nath, H. Ltaeif, and J. Dongarra, “Dense Linear Algebra Solvers for Multicore with GPU Accelerators,” Parallel Distributed Processing, Workshops and Phd Forum (IPDPSW), 2010 IEEE International Symposium on, Atlanta, GA, pp. 1-8, 2010.  (1 MB)
Roche, K., and J. Dongarra, “Deploying Parallel Numerical Library Routines to Cluster Computing in a Self Adapting Fashion,” Parallel Computing: Advances and Current Issues:Proceedings of the International Conference ParCo2001, London, England, Imperial College Press, January 2002.  (381.89 KB)
You, H., Q. Liu, Z. Li, and S. Moore, “The Design of an Auto-tuning I/O Framework on Cray XT5 System,” Cray Users Group Conference (CUG'11) (Best Paper Finalist), Fairbanks, Alaska, May 2011.  (459.57 KB)
Luszczek, P., and J. Dongarra, “Design of an Interactive Environment for Numerically Intensive Parallel Linear Algebra Calculations,” International Conference on Computational Science, Poland, Springer Verlag, June 2004.  (88.31 KB)
Haidar, A., A. Abdelfattah, M. Zounon, P. Wu, S. Pranesh, S. Tomov, and J. Dongarra, “The Design of Fast and Energy-Efficient Linear Solvers: On the Potential of Half-Precision Arithmetic and Iterative Refinement Techniques,” International Conference on Computational Science (ICCS 2018), vol. 10860, Wuxi, China, Springer, pp. 586–600, June 2018.  (487.88 KB)
Fürlinger, K., and S. Moore, “Detection and Analysis of Iterative Behavior in Parallel Applications,” Proceedings of the 2008 International Conference on Computational Science (ICCS 2008), vol. 5103, Krakow, Poland, pp. 261-267, January 2008.  (141.02 KB)
Arnold, D., and J. Dongarra, “Developing an Architecture to Support the Implementation and Development of Scientific Computing Applications,” to appear in Proceedings of Working Conference 8: Software Architecture for Scientific Computing Applications, Ottawa, Canada, October 2000.  (176.25 KB)
Bosilca, G., A. Bouteiller, T. Herault, P. Lemariner, and J. Dongarra, “Dodging the Cost of Unavoidable Memory Copies in Message Logging Protocols,” Proceedings of EuroMPI 2010, Stuttgart, Germany, Springer, September 2010.  (202.87 KB)
Anzt, H., E. Chow, D. Szyld, and J. Dongarra, “Domain Overlap for Iterative Sparse Triangular Solves on GPUs,” Software for Exascale Computing - SPPEXA, vol. 113: Springer International Publishing, pp. 527–545, September 2016.
Cronk, D., G. Fagg, S. Emeny, and S. Tucker, “Dynamic Process Management for Pipelined Applications,” Proceedings of DoD HPCMP UGC 2005 (to appear), Nashville, TN, IEEE, January 2005.
Hoque, R., T. Herault, G. Bosilca, and J. Dongarra, “Dynamic Task Discovery in PaRSEC- A data-flow task-based Runtime,” ScalA17, Denver, ACM, September 2017.  (1.15 MB)
Song, F., A. YarKhan, and J. Dongarra, “Dynamic Task Scheduling for Linear Algebra Algorithms on Distributed-Memory Multicore Systems,” International Conference for High Performance Computing, Networking, Storage, and Analysis (SC '09), Portland, OR, November 2009.  (502.49 KB)
Dissertation
YarKhan, A., Dynamic Task Execution on Shared and Distributed Memory Architectures , 2012.  (3.29 MB)
Journal Article
Bosilca, G., A. Bouteiller, A. Danalis, T. Herault, P. Lemariner, and J. Dongarra, “DAGuE: A generic distributed DAG Engine for High Performance Computing.,” Parallel Computing, vol. 38, no. 1-2: Elsevier, pp. 27-51, 00 2012.  (830.85 KB)
Dongarra, J., R. Graybill, W. Harrod, R. Lucas, E. Lusk, P. Luszczek, J. McMahon, A. Snavely, J. Vetter, K. Yelick, et al., “DARPA's HPCS Program: History, Models, Tools, Languages,” in Advances in Computers, vol. 72: Elsevier, January 2008.  (3.61 MB)
Pjesivac–Grbovic, J., G. Bosilca, G. Fagg, T. Angskun, and J. Dongarra, “Decision Trees and MPI Collective Algorithm Selection Problem,” Euro-Par 2007, Rennes, France, Springer, pp. 105–115, August 2007.  (552.94 KB)
Dongarra, J., J. Kurzak, P. Luszczek, and S. Tomov, “Dense Linear Algebra on Accelerated Multicore Hardware,” High Performance Scientific Computing: Algorithms and Applications, London, UK, Springer-Verlag, 00 2012.
Bosilca, G., A. Bouteiller, A. Danalis, T. Herault, P. Luszczek, and J. Dongarra, “Dense Linear Algebra on Distributed Heterogeneous Hardware with a Symbolic DAG Approach,” Scalable Computing and Communications: Theory and Practice: John Wiley & Sons, pp. 699-735, March 2013.  (1.01 MB)
Kurzak, J., H. Ltaeif, J. Dongarra, and R. M. Badia, “Dependency-Driven Scheduling of Dense Matrix Factorizations on Shared-Memory Systems,” PPAM 2009, Poland, September 2009.
Casanova, H., J. Plank, M. Beck, and J. Dongarra, “Deploying Fault-tolerance and Task Migration with NetSolve,” Future Generation Computer Systems, vol. 15, no. 5-6: Elsevier, pp. 745-755, October 1999.  (236 KB)
D'Azevedo, E., and J. Dongarra, “The Design and Implementation of the Parallel Out of Core ScaLAPACK LU, QR, and Cholesky Factorization Routines,” Concurrency: Practice and Experience, vol. 12, no. 15, pp. 1481-1493, January 2000.  (374.18 KB)
Kurzak, J., P. Luszczek, I. Yamazaki, Y. Robert, and J. Dongarra, “Design and Implementation of the PULSAR Programming System for Large Scale Computing,” Supercomputing Frontiers and Innovations, vol. 4, issue 1, 2017.  (764.96 KB)
Valeev, E. F., R. J. Harrison, A. A. Holmes, C. C. Peterson, and D. A. Penchoff, “Direct Determination of Optimal Real-Space Orbitals for Correlated Electronic Structure of Molecules,” Journal of Chemical Theory and Computation, vol. 19, issue 20, pp. 7230 - 7241, October 2023.
Dongarra, J., Z. Chen, G. Bosilca, and J. Langou, “Disaster Survival Guide in Petascale Computing: An Algorithmic Approach,” in Petascale Computing: Algorithms and Applications (to appear): Chapman & Hall - CRC Press, 00 2007.  (260.18 KB)
Hiroyasu, T., M. Miki, M. Sano, H. Shimosaka, S. Tsutsui, and J. Dongarra, “Distributed Probablistic Model-Building Genetic Algorithm,” Lecture Notes in Computer Science, vol. 2723: Springer-Verlag, Heidelberg, pp. 1015-1028, January 2003.  (288.91 KB)
Boehmann, T. B., “Distributed Storage in RIB,” ICL Tech Report, no. ICL-UT-03-01, March 2003.  (213.02 KB)
Yamazaki, I., A. Ida, R. Yokota, and J. Dongarra, “Distributed-Memory Lattice H-Matrix Factorization,” The International Journal of High Performance Computing Applications, vol. 33, issue 5, pp. 1046–1063, August 2019.  (1.14 MB)

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